ZFIN ID: ZDB-GENE-061215-58
Gene Name: zgc:158423
Gene Symbol: zgc:158423    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have catalytic activity. Predicted to be involved in carbohydrate metabolic process. Predicted to localize to the integral component of membrane. Orthologous to human SLC3A2 (solute carrier family 3 member 2).
Genome Resources: Alliance (1),  Gene:790938 (1),  Ensembl(GRCz11):ENSDARG00000055791 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34044 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:158423 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:158423 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process amino acid transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR006047 Glycosyl hydrolase, family 13, catalytic domain
    Domain IPR031984 Solute carrier family 3 member 2, N-terminal domain
    Family IPR042280 4F2 cell-surface antigen heavy chain
    Homologous_superfamily IPR013780 Glycosyl hydrolase, all-beta
    Homologous_superfamily IPR017853 Glycoside hydrolase superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:158423-201 (1)    Ensembl 1701
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:158423 No data available
    MARKER RELATIONSHIPS
    zgc:158423 Contained in: [BAC] DKEY-19B23 (1) (order this)
    zgc:158423 Encodes: [cDNA] MGC:158423 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080083 (1) 1723 nt
    Genomic GenBank:CR318653 (1) 235090 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8Q8P1 (1) 484 aa
    Sequence Information (all 11)
    ORTHOLOGY for zgc:158423 ( Chr: 7 )
    CITATIONS (14)