ZFIN ID: ZDB-GENE-061215-54
Gene Name: 2-oxoglutarate and iron-dependent oxygenase domain containing 2
Gene Symbol: ogfod2    Nomenclature History

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Previous Names: si:dkey-21k4.1, zgc:158437

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have L-ascorbic acid binding activity; iron ion binding activity; and oxidoreductase activity. Predicted to be involved in oxidation-reduction process. Orthologous to human OGFOD2 (2-oxoglutarate and iron dependent oxygenase domain containing 2).
Genome Resources: Alliance (1),  Gene:790923 (1),  Ensembl(GRCz11):ENSDARG00000056211 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a310 Indel Unknown Unknown CRISPR
sa17801 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20432 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40441 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-ogfod2 1
    CRISPR2-ogfod2 1
    CRISPR3-ogfod2 1
    CRISPR4-ogfod2 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ogfod2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ogfod2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process oxidation-reduction process (more)
    Cellular Component cellular_component (more)
    Molecular Function dioxygenase activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ogfod2-201 (1)    Ensembl 1171
    ncRNA ogfod2-002 (1)    Ensembl 446
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ogfod2 No data available
    MARKER RELATIONSHIPS
    ogfod2 Contained in: [BAC] DKEY-21K4 (1) (order this)
    ogfod2 Encodes: [cDNA] MGC:158437 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080069 (1) 1470 nt
    Genomic GenBank:AL929297 (1) 104074 nt
    Select Tool
    Polypeptide UniProtKB:A3KGZ2 (1) 345 aa
    Sequence Information (all 13)
    ORTHOLOGY for ogfod2 ( Chr: 5 )
    CITATIONS (16)