ZFIN ID: ZDB-GENE-061215-126
Gene Name: ATPase type 13A2
Gene Symbol: atp13a2

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: im:7147302, zgc:136762

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7147302]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 6 (144.0h-168.0h)
  brain, unspecified, whole organism
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1158 Point Mutation Unknown Splice Site ENU
sa3236 Point Mutation Unknown Splice Site ENU
sa6735 Point Mutation Unknown Splice Site ENU
sa14250 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18624 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-atp13a2 (1)
    PHENOTYPE
    Data: 2 figures from Lopes da Fonseca et al., 2013
    Observed in: embryo development, locomotory behavior, swimming, whole organism
    DISEASE ASSOCIATED WITH atp13a2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Kufor-Rakeb syndrome Kufor-Rakeb syndrome 606693
    ?Ceroid lipofuscinosis, neuronal, 12 606693
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chordate embryonic development (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ATP binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001757 (1)
  • InterPro:IPR004014 (1)
  • InterPro:IPR006544 (1)
  • InterPro:IPR008250 (1)
  • InterPro:IPR018303 (1)
  • InterPro:IPR023214 (1)
  • InterPro:IPR023299 (1)
  • PROSITE:PS00154 (1)
  • Pfam:PF00122 (1)
  • Pfam:PF00690 (1)
  • Pfam:PF12409 (1)
  • EC:3.6.3.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp13a2-001 (1) 4976
    atp13a2-002 (1) 412
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp13a2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp13a2Contained in: [BAC] DKEY-31B16 (1) (order this)
    atp13a2Encodes: [EST] IMAGE:7147302 (1) (order this)
    [cDNA] MGC:136762 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080037 (1) 4992bp
    Genomic GenBank:BX957326 (1) 259092bp Blast at MegaBLAST
    Polypeptide UniProtKB:A1A5E5 (1) 1170aa
    Sequence Clusters UniGene:66579 (1)
    Sequence Information (all 13)
    OTHER atp13a2 GENE PAGES
  • Gene:568666 (1)
  • VEGA:OTTDARG00000028621 (1)
  • Ensembl(GRCz10):ENSDARG00000061890 (1)
  • ORTHOLOGY for atp13a2 (Chr: 23)
    Species Symbol Chromosome Accession # Evidence
    Human ATP13A2 1
  • Gene:23400
  • OMIM:610513
  • HGNC:30213
  • Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Mouse Atp13a2 4
  • MGI:1922022
  • Gene:74772
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (16)