ZFIN ID: ZDB-GENE-061215-126
Gene Name: ATPase type 13A2
Gene Symbol: atp13a2
Previous Names: im:7147302, zgc:136762
Location: Chr: 23   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7147302]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 6 (144.0h-168.0h)
  brain, unspecified, whole organism
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 1 genotype
Alleles: sa1158, sa14250, sa18624
Knockdown reagents: MO1-atp13a2 (1)
PHENOTYPE
Data: 2 figures from Lopes da Fonseca et al., 2013
Observed in: embryo development, locomotory behavior, swimming, whole organism

Phenotype of Human Orthologue OMIM Phenotype ID
Kufor-Rakeb syndrome 606693
?Ceroid lipofuscinosis, neuronal, 12 606693
GENE ONTOLOGY
Ontology GO Term
Biological Process embryo development (more)
Cellular Component integral component of membrane (more)
Molecular Function ATP binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001757 (1)
  • InterPro:IPR004014 (1)
  • InterPro:IPR006544 (1)
  • InterPro:IPR008250 (1)
  • InterPro:IPR018303 (1)
  • InterPro:IPR023214 (1)
  • InterPro:IPR023299 (1)
  • PROSITE:PS00154 (1)
  • Pfam:PF00122 (1)
  • Pfam:PF00690 (1)
  • Pfam:PF12409 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp13a2-001 (1) 4976
    atp13a2-002 (1) 412
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp13a2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    atp13a2 Contained in: [BAC] DKEY-31B16 (1)
    atp13a2 Encodes: [EST] IMAGE:7147302 (1) (order this)
    [cDNA] MGC:136762 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080037 (1) 4992 bp
    Genomic GenBank:BX957326 (1) 259092 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A1A5E5 (1) 1170 aa
    Sequence Clusters UniGene:66579 (1)
    Sequence Information (all 13)
    OTHER atp13a2 GENE PAGES
  • Gene:568666 (1)
  • VEGA:OTTDARG00000028621 (1)
  • Ensembl(Zv9):ENSDARG00000061890 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish atp13a2 23  
    Human ATP13A2 1 (1p36)
  • OMIM:610513
  • Gene:23400
  • Mouse Atp13a2 4 ( 73.29 cM)
  • MGI:1922022
  • Gene:74772
  • Orthology Details
    CITATIONS (14)