Gene
si:dkey-224e22.2
- ID
- ZDB-GENE-061207-59
- Name
- si:dkey-224e22.2
- Symbol
- si:dkey-224e22.2 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Description
- Predicted to enable beta-galactosidase activity. Acts upstream of or within cilium assembly. Located in ciliary base. Orthologous to several human genes including GLB1L2 (galactosidase beta 1 like 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Choksi et al., 2014
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Choksi et al., 2014
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Targeting Reagent | Created Alleles | Citations |
|---|---|---|
| MO1-si:dkey-224e22.2 | N/A | Choksi et al., 2014 |
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Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019801 | Glycoside hydrolase, family 35, conserved site |
| Domain | IPR031330 | Glycoside hydrolase 35, catalytic domain |
| Domain | IPR048912 | Beta-galactosidase 1-like , first all-beta domain |
| Domain | IPR048913 | Beta-galactosidase, galactose-binding domain |
| Family | IPR001944 | Glycoside hydrolase, family 35 |
| Family | IPR026283 | Beta-galactosidase 1-like |
| Homologous_superfamily | IPR008979 | Galactose-binding-like domain superfamily |
| Homologous_superfamily | IPR017853 | Glycoside hydrolase superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Beta-galactosidase 1-like | Beta-galactosidase 1-like , first all-beta domain | Beta-galactosidase, galactose-binding domain | Galactose-binding-like domain superfamily | Glycoside hydrolase 35, catalytic domain | Glycoside hydrolase, family 35 | Glycoside hydrolase, family 35, conserved site | Glycoside hydrolase superfamily |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AS61 | InterPro | 646 | ||||||||
| UniProtKB:A2BIK1 | InterPro | 603 | ||||||||
| UniProtKB:A0A8M3AJT8 | InterPro | 614 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
glb1l2-201
(1)
|
Ensembl | 1,843 nt | ||
| mRNA |
glb1l2-202
(1)
|
Ensembl | 672 nt | ||
| mRNA |
si:dkey-224e22.2-203
(1)
|
Ensembl | 1,812 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-224E22 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:XM_009293833 (1) | |||
| Genomic | GenBank:BX936429 (1) | 158832 nt | ||
| Polypeptide | UniProtKB:A0A8M3AS61 (1) | 646 aa |
No data available