ZFIN ID: ZDB-GENE-061207-1
Gene Name: zic family member 6
Gene Symbol: zic6    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in spinal cord development. Predicted to localize to nucleus. Is expressed in ectoderm; hindbrain neural plate; and neural plate.
Genome Resources: Alliance (1),  Gene:415097 (1),  Ensembl(GRCz11):ENSDARG00000071496 (2)
GENE EXPRESSION
All Expression Data: 2 figures from Keller et al., 2007
Wild-type Stages, Structures: Gastrula:90%-epiboly (9.0h-10.0h) to Segmentation:1-4 somites (10.33h-11.66h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22509 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35714 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-zic6 N/A 1
    DISEASE ASSOCIATED WITH zic6 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zic6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process spinal cord development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zic6-201 (1)    Ensembl 2423
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zic6 No data available
    MARKER RELATIONSHIPS
    zic6 Contained in: [BAC] CH211-69B22
    zic6 Encodes: [EST] fc14g04 (1)
    [cDNA] MGC:193970 (1), MGC:193997 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001001837 (1) 2305 nt
    Genomic GenBank:BX511142 (1) 168322 nt
    Select Tool
    Polypeptide UniProtKB:Q6PWU7 (1) 525 aa
    Sequence Information (all 26)
    ORTHOLOGY for zic6 ( Chr: 14 )
    CITATIONS (24)