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ZIRC
ZFIN ID: ZDB-GENE-061110-88
Gene Name: ubiquitin C
Gene Symbol: ubc    Nomenclature History

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Previous Names: im:7042025, wu:fb37h06, zgc:153686 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have protein tag and ubiquitin protein ligase binding activity. Predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination. Predicted to localize to the cytoplasm and nucleus. Orthologous to human UBC (ubiquitin C).
Genome Resources: Alliance (1),  Gene:777766 (1),  Ensembl(GRCz11):ENSDARG00000102632 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (0 images) from Rauch et al., 2003 [fb17g05]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898771]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ubc HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ubc VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process modification-dependent protein catabolic process (more)
Cellular Component cytoplasm (more)
Molecular Function protein tag (more)
GO Terms (all 6)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ubc-201 (1)    Ensembl 1785
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ubc No data available
MARKER RELATIONSHIPS
ubc Contained in: [BAC] CH211-226M13 (1) (order this)
ubc Encodes: [EST] fb17g05 (1) (order this), fb37h06, IMAGE:6898771 (order this), IMAGE:7042025
[cDNA] MGC:153686 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001077804 (1) 1800 bp
Genomic GenBank:CU463283 (1) 121463 bp
Select Tool
Polypeptide UniProtKB:A0JPF1 (1) 533 aa
Sequence Clusters UniGene:75568 (1)
Sequence Information (all 20)
ORTHOLOGY for ubc ( Chr: 10 )
CITATIONS (22)