ZFIN ID: ZDB-GENE-061110-88
Gene Name: ubiquitin C
Gene Symbol: ubc
Sequence Ontology ID : SO:0000704

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Previous Names: im:7042025, wu:fb37h06, zgc:153686 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein tag and ubiquitin protein ligase binding activity; predicted to be involved in modification-dependent protein catabolic process and protein ubiquitination; predicted to  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (0 images) from Rauch et al., 2003 [fb17g05]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898771]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ubc HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ubc VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function molecular_function (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR019954 (1)
  • InterPro:IPR019956 (1)
  • InterPro:IPR029071 (1)
  • PROSITE:PS00299 (1)
  • PROSITE:PS50053 (1)
  • Pfam:PF00240 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ubc-201 (1) 1785
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ubc No data available
    MARKER RELATIONSHIPS
    ubcContained in: [BAC] CH211-226M13 (1) (order this)
    ubcEncodes: [EST] fb17g05 (1) (order this), fb37h06, IMAGE:6898771 (order this), IMAGE:7042025
    [cDNA] MGC:153686 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077804 (1) 1800bp
    Genomic GenBank:CU463283 (1) 121463bp
    Select Tool
    Polypeptide UniProtKB:A0JPF1 (1) 533aa
    Sequence Clusters UniGene:75568 (1)
    Sequence Information (all 20)
    OTHER ubc GENE PAGES
  • Alliance (1)
  • Gene:777766 (1)
  • VEGA:OTTDARG00000030831 (1)
  • Ensembl(GRCz11):ENSDARG00000102632 (1)
  • ORTHOLOGY for ubc (Chr: 10)
    CITATIONS (21)