ZFIN ID: ZDB-GENE-061110-88
Gene Name: ubiquitin C
Gene Symbol: ubc
Sequence Ontology ID : SO:0000704

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Previous Names: im:7042025, wu:fb37h06, zgc:153686 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (0 images) from Rauch et al., 2003 [fb17g05]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898771]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ubc HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function molecular_function (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000626 (1)
  • InterPro:IPR019954 (1)
  • InterPro:IPR019956 (1)
  • InterPro:IPR029071 (1)
  • PROSITE:PS00299 (1)
  • PROSITE:PS50053 (1)
  • Pfam:PF00240 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ubc-001 (1) 1785
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ubc
    tg(elavl3-ubc:cerulean)
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    ubcContained in: [BAC] CH211-226M13 (1) (order this)
    ubcEncodes: [EST] fb17g05 (1) (order this), fb37h06, IMAGE:6898771 (order this), IMAGE:7042025
    [cDNA] MGC:153686 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077804 (1) 1835bp
    Genomic GenBank:CU463283 (1) 121463bp
    Select Tool
    Polypeptide UniProtKB:A0JPF1 (1) 533aa
    Sequence Clusters UniGene:75568 (1)
    Sequence Information (all 19)
    OTHER ubc GENE PAGES
  • Gene:777766 (1)
  • VEGA:OTTDARG00000030831 (1)
  • Ensembl(GRCz10):ENSDARG00000102632 (1)
  • ORTHOLOGY for ubc (Chr: 10)
    CITATIONS (18)