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ZIRC
ZFIN ID: ZDB-GENE-061103-295
Gene Name: sphingomyelin synthase 1
Gene Symbol: sgms1    Nomenclature History

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Previous Name: zgc:154039

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have ceramide cholinephosphotransferase activity and sphingomyelin synthase activity. Predicted to be involved in ceramide biosynthetic process and sphingomyelin biosynthetic process. Predicted to localize to the integral component of Golgi membrane; integral component of endoplasmic reticulum membrane; and integral component of plasma membrane. Orthologous to human SGMS1 (sphingomyelin synthase 1).
Genome Resources: Alliance (1),  Gene:566563 (1),  Ensembl(GRCz11):ENSDARG00000029621 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12691 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sgms1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sgms1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ceramide biosynthetic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ceramide cholinephosphotransferase activity (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sgms1-201 (1)    Ensembl 693
    sgms1-202 (1)    Ensembl 2522
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sgms1 No data available
    MARKER RELATIONSHIPS
    sgms1 Contained in: [BAC] CH211-215L11 (1) (order this)
    sgms1 Encodes: [cDNA] MGC:154039 (1) (order this), MGC:191676 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077614 (1) 2346 bp
    Genomic GenBank:BX248126 (1) 193490 bp
    Select Tool
    Polypeptide UniProtKB:A0JMN0 (1) 404 aa
    Sequence Clusters UniGene:83960 (1)
    Sequence Information (all 14)
    ORTHOLOGY for sgms1 ( Chr: 12 )
    CITATIONS (15)