ZFIN ID: ZDB-GENE-061103-295
Gene Name: sphingomyelin synthase 1
Gene Symbol: sgms1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:154039

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ceramide cholinephosphotransferase activity and sphingomyelin synthase activity; predicted to be involved in ceramide biosynthetic process and sphingomyelin biosynthetic process;  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12691 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sgms1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sgms1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ceramide biosynthetic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ceramide cholinephosphotransferase activity (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001660 (1)
  • InterPro:IPR013761 (1)
  • InterPro:IPR025749 (1)
  • PROSITE:PS50105 (1)
  • Pfam:PF00536 (1)
  • Pfam:PF14360 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sgms1-201 (1) 693
    sgms1-202 (1) 2522
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sgms1 No data available
    MARKER RELATIONSHIPS
    sgms1Contained in: [BAC] CH211-215L11 (1) (order this)
    sgms1Encodes: [cDNA] MGC:154039 (1) (order this), MGC:191676 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077614 (1) 2346bp
    Genomic GenBank:BX248126 (1) 193490bp
    Select Tool
    Polypeptide UniProtKB:A0JMN0 (1) 404aa
    Sequence Clusters UniGene:83960 (1)
    Sequence Information (all 14)
    OTHER sgms1 GENE PAGES
  • Alliance (1)
  • Gene:566563 (1)
  • VEGA:OTTDARG00000027421 (1)
  • Ensembl(GRCz11):ENSDARG00000029621 (2)
  • ORTHOLOGY for sgms1 (Chr: 12)
    CITATIONS (15)