ZFIN ID: ZDB-GENE-061103-178
Gene Name: activating transcription factor 7 interacting protein
Gene Symbol: atf7ip    Nomenclature History

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Previous Names: fa12g02, wu:fa12g02, zgc:152981

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to be involved in positive regulation of DNA methylation-dependent heterochromatin assembly and protein stabilization. Predicted to localize to nucleus. Orthologous to human ATF7IP (activating transcription factor 7 interacting protein).
Genome Resources: Alliance (1),  Gene:558977 (1),  Ensembl(GRCz11):ENSDARG00000069619 (2)
GENE EXPRESSION
All Expression Data: Fig. 5 from Samarut et al., 2016
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021227Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028161Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028162Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028163Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6602 Point Mutation Unknown Premature Stop ENU
    sa32740 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atf7ip HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atf7ip VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of DNA methylation-dependent heterochromatin assembly (more)
    Cellular Component nucleus (more)
    Molecular Function molecular_function (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atf7ip-201 (1)    Ensembl 3061
    atf7ip-202 (1)    Ensembl 607
    atf7ip-203 (1)    Ensembl 3286
    atf7ip-204 (1)    Ensembl 837
    atf7ip-206 (1)    Ensembl 577
    atf7ip-207 (1)    Ensembl 624
    ncRNA atf7ip-007 (1)    Ensembl 690
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atf7ip No data available
    MARKER RELATIONSHIPS
    atf7ip Contained in: [BAC] DKEY-48A12 (1) (order this)
    atf7ip Encodes: [EST] fa12g02
    [cDNA] MGC:152981 (1), MGC:191749 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001077603 (1) 3301 nt
    Genomic GenBank:BX537268 (1) 138906 nt
    Select Tool
    Polypeptide UniProtKB:F8W5Q4 (1) 858 aa
    Sequence Information (all 39)
    ORTHOLOGY for atf7ip ( Chr: 1 )
    CITATIONS (28)