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ZIRC
ZFIN ID: ZDB-GENE-061020-1
Gene Name: isochorismatase domain containing 1
Gene Symbol: isoc1    Nomenclature History

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Previous Name: zgc:153699

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have catalytic activity. Predicted to localize to the cytoplasm. Orthologous to human ISOC1 (isochorismatase domain containing 1).
Genome Resources: Alliance (1),  Gene:559897 (1),  Ensembl(GRCz11):ENSDARG00000060069 (2)
GENE EXPRESSION
All Expression Data: Table 1 from Xu et al., 2013
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21698 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21699 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH isoc1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH isoc1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cytoplasm (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000868 (1)
  • InterPro:IPR036380 (1)
  • Pfam:PF00857 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA isoc1-201 (1)    Ensembl 2380
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM isoc1 No data available
    MARKER RELATIONSHIPS
    isoc1 Contained in: [BAC] DKEY-93E24 (1) (order this)
    isoc1 Encodes: [cDNA] MGC:153699 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001079981 (1) 2379 bp
    Genomic GenBank:CR790388 (1) 207068 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q08C33 (1) 283 aa
    Sequence Clusters UniGene:79345 (1)
    Sequence Information (all 11)
    ORTHOLOGY for isoc1 ( Chr: 10 )
    CITATIONS (19)