ZFIN ID: ZDB-GENE-061013-757
Gene Name: snail family zinc finger 3
Gene Symbol: snai3    Nomenclature History

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Previous Name: zgc:153535

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to the nucleus. Is expressed in notochord and somite. Orthologous to human SNAI3 (snail family transcriptional repressor 3).
Genome Resources: Alliance (1),  Gene:567724 (1),  Ensembl(GRCz11):ENSDARG00000031243 (1)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Segmentation:10-13 somites (14.0h-16.0h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH snai3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH snai3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription, DNA-templated (more)
Cellular Component nucleus (more)
Molecular Function metal ion binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR013087 Zinc finger C2H2-type
Homologous_superfamily IPR036236 Zinc finger C2H2 superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA snai3-201 (1)    Ensembl 1393
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM snai3 No data available
MARKER RELATIONSHIPS
snai3 Contained in: [BAC] CH211-206I14 (1)
snai3 Encodes: [cDNA] MGC:153535 (1), MGC:192638 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001077385 (1) 1380 bp
Genomic GenBank:BX088687 (1) 173867 bp
Select Tool
Polypeptide UniProtKB:F1QNL2 (1) 283 aa
Sequence Information (all 13)
ORTHOLOGY for snai3 ( Chr: 7 )
CITATIONS (22)