ZFIN ID: ZDB-GENE-061013-622
Gene Name: zgc:153738
Gene Symbol: zgc:153738
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: Fig. S3 from Choksi et al., 2014
Wild-type Stages, Structures: Segmentation:26+ somites (22.0h-24.0h) to Segmentation:26+ somites (22.0h-24.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:153738 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:153738 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component cellular_component (more)
Molecular Function ATP binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000048 (1)
  • InterPro:IPR003593 (1)
  • InterPro:IPR003959 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS50096 (1)
  • Pfam:PF00004 (1)
  • Pfam:PF00612 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:153738-001 (1) 2735
    ncRNA zgc:153738-002 (1) 2245
    mRNA zgc:153738-003 (1) 2012
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:153738 No data available
    MARKER RELATIONSHIPS
    zgc:153738Contained in: [BAC] DKEY-30H22 (1) (order this)
    zgc:153738Encodes: [cDNA] MGC:153738 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001079968 (1) 1977bp
    Genomic GenBank:AL844185 (1) 180872bp
    Select Tool
    Polypeptide UniProtKB:A5PF14 (1) 818aa
    Sequence Clusters UniGene:123845 (1)
    Sequence Information (all 17)
    OTHER zgc:153738 GENE PAGES
  • Alliance (1)
  • Gene:558115 (1)
  • VEGA:OTTDARG00000034604 (1)
  • Ensembl(GRCz11):ENSDARG00000069230 (2)
  • ORTHOLOGY for zgc:153738 (Chr: 8)
    CITATIONS (14)