ZFIN ID: ZDB-GENE-061013-557
Gene Name: sorting nexin family member 21
Gene Symbol: snx21    Nomenclature History

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Previous Name: zgc:153354

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have phosphatidylinositol binding activity. Predicted to be involved in protein transport. Orthologous to human SNX21 (sorting nexin family member 21).
Genome Resources: Alliance (1),  Gene:555580 (1),  Ensembl(GRCz11):ENSDARG00000062770 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014308Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10604 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH snx21 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snx21 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein transport (more)
    Cellular Component cellular_component (more)
    Molecular Function phosphatidylinositol binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA snx21-201 (1)    Ensembl 1415
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snx21 No data available
    MARKER RELATIONSHIPS
    snx21 Contained in: [BAC] CH211-153A8 (1)
    snx21 Encodes: [cDNA] MGC:153354 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001077368 (1) 1434 nt
    Genomic GenBank:AL928967 (1) 186487 nt
    Select Tool
    Polypeptide UniProtKB:Q08BL4 (1) 395 aa
    Sequence Information (all 8)
    ORTHOLOGY for snx21 ( Chr: 23 )
    CITATIONS (19)