ZFIN ID: ZDB-GENE-061013-552
Gene Name: transcription factor A, mitochondrial
Gene Symbol: tfam
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:153358

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity; predicted to localize to the nucleus; orthologous to human TFAM (transcription factor A, mitochondrial).
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Cleavage:64-cell (2.0h-2.25h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tfam HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
mitochondrial DNA depletion syndrome 15 ?Mitochondrial DNA depletion syndrome 15 (hepatocerebral type) 617156
DISEASE ASSOCIATED WITH tfam VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR009071 (1)
  • InterPro:IPR036910 (1)
  • PROSITE:PS50118 (1)
  • Pfam:PF00505 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tfam-201 (1) 1356
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tfam No data available
    MARKER RELATIONSHIPS
    tfamContained in: [BAC] CH211-79A2 (1) (order this)
    tfamEncodes: [cDNA] MGC:153358 (1) (order this), MGC:192632 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077389 (1)
    Genomic GenBank:CU326359 (1) 101142bp
    Select Tool
    Polypeptide UniProtKB:F1QF85 (1) 277aa
    Sequence Clusters UniGene:20000 (1)
    Sequence Information (all 15)
    OTHER tfam GENE PAGES
  • Alliance (1)
  • Gene:571106 (1)
  • VEGA:OTTDARG00000040187 (1)
  • Ensembl(GRCz11):ENSDARG00000063145 (2)
  • ORTHOLOGY for tfam (Chr: 12)
    CITATIONS (26)