ZFIN ID: ZDB-GENE-061013-517
Gene Name: sterile alpha motif domain containing 1a
Gene Symbol: samd1a    Nomenclature History

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Previous Name: zgc:153652 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Orthologous to human SAMD1 (sterile alpha motif domain containing 1).
Genome Resources: Alliance (1),  Gene:768149 (1),  Ensembl(GRCz11):ENSDARG00000102810 (1)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12607 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH samd1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH samd1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001660 Sterile alpha motif domain
    Homologous_superfamily IPR013761 Sterile alpha motif/pointed domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA samd1a-001 (1) 1507
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM samd1a No data available
    MARKER RELATIONSHIPS
    samd1a Contained in: [BAC] DKEY-27E20 (1) (order this)
    samd1a Encodes: [cDNA] MGC:153652 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077292 (1) 1539 bp
    Genomic GenBank:CR847534 (1) 211145 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IFY9 (1) 377 aa
    Sequence Information (all 15)
    ORTHOLOGY for samd1a ( Chr: 3 )
    CITATIONS (15)