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ZIRC
ZFIN ID: ZDB-GENE-061013-497
Gene Name: KH domain containing, RNA binding, signal transduction associated 2
Gene Symbol: khdrbs2    Nomenclature History

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Previous Name: zgc:153588

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have SH3 domain binding activity and poly(A) binding activity. Predicted to be involved in regulation of mRNA splicing, via spliceosome. Predicted to localize to the nucleus. Is expressed in central nervous system; eye; and testis. Orthologous to human KHDRBS2 (KH RNA binding domain containing, signal transduction associated 2).
Genome Resources: Alliance (1),  Gene:768147 (1),  Ensembl(GRCz11):ENSDARG00000069469 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6297 Point Mutation Unknown Splice Site ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH khdrbs2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH khdrbs2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mRNA processing (more)
Cellular Component nucleus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 6)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA khdrbs2-201 (1)    Ensembl 2070
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM khdrbs2 No data available
MARKER RELATIONSHIPS
khdrbs2 Contained in: [BAC] DKEY-103J14 (1) (order this), DKEY-183G8 (1) (order this)
khdrbs2 Encodes: [cDNA] MGC:153588 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001077290 (1) 2044 bp
Genomic GenBank:CR356222 (1) 206656 bp Blast at MegaBLAST
Polypeptide UniProtKB:Q08BJ2 (1) 346 aa
Sequence Clusters UniGene:92774 (1)
Sequence Information (all 16)
ORTHOLOGY for khdrbs2 ( Chr: 13 )
CITATIONS (19)