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ZIRC
ZFIN ID: ZDB-GENE-061013-482
Gene Name: testis specific, 10
Gene Symbol: tsga10    Nomenclature History

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Previous Name: zgc:152952

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to be involved in spermatogenesis. Human ortholog(s) of this gene implicated in male infertility. Orthologous to human TSGA10 (testis specific 10).
Genome Resources: Alliance (1),  Gene:768146 (1),  Ensembl(GRCz11):ENSDARG00000052512 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa31234 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tsga10 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    ?Spermatogenic failure 26 617961
    DISEASE ASSOCIATED WITH tsga10 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process spermatogenesis (more)
    Cellular Component cellular_component (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR033323 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tsga10-201 (1)    Ensembl 2440
    tsga10-203 (1)    Ensembl 353
    tsga10-207 (1)    Ensembl 595
    ncRNA tsga10-003 (1)    Ensembl 1526
    tsga10-004 (1)    Ensembl 764
    tsga10-005 (1)    Ensembl 440
    tsga10-006 (1)    Ensembl 433
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tsga10 No data available
    MARKER RELATIONSHIPS
    tsga10 Contained in: [BAC] CH211-149L1 (1) (order this), CH211-281G13 (1) (order this)
    tsga10 Has Artifact: [cDNA] MGC:152952 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077289 (1) 1620 bp
    Genomic GenBank:BX321880 (1) 144139 bp
    Select Tool
    Polypeptide UniProtKB:B8A4S2 (1) 710 aa
    Sequence Clusters UniGene:83508 (1)
    Sequence Information (all 23)
    ORTHOLOGY for tsga10 ( Chr: 1 )
    CITATIONS (16)