Gene

slc6a16a

ID

ZDB-GENE-061009-43

Name

solute carrier family 6 member 16a

Symbol

slc6a16a Nomenclature History

Previous Names

si:dkey-29b22.6

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to have neurotransmitter:sodium symporter activity. Predicted to localize to plasma membrane. Orthologous to human SLC6A16 (solute carrier family 6 member 16).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With slc6a16a Human Ortholog

No data available

Associated With slc6a16a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR000175	Sodium:neurotransmitter symporter
Homologous_superfamily	IPR037272	Sodium:neurotransmitter symporter superfamily

Domain Details Per Protein

Protein	Length	Sodium:neurotransmitter symporter	Sodium:neurotransmitter symporter superfamily
UniProtKB:A0A8M9PXM9 InterPro	693
UniProtKB:A0A8M9PD65 InterPro	693

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	slc6a16a-203 (1) Ensembl	Havana	1760 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	slc6a16a-002 (1) Ensembl	Havana	762 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations