ZFIN ID: ZDB-GENE-061009-3
Gene Name: tripartite motif containing 35-31
Gene Symbol: trim35-31    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: si:ch211-106h11.4 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have ubiquitin-protein transferase activity and zinc ion binding activity. Predicted to be involved in protein ubiquitination. Orthologous to human TRIM35 (tripartite motif containing 35).
Genome Resources: Alliance (1),  Gene:560122 (1),  Ensembl(GRCz11):ENSDARG00000052097 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39979 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH trim35-31 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH trim35-31 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein ubiquitination (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000315 B-box-type zinc finger
    Domain IPR001841 Zinc finger, RING-type
    Domain IPR001870 B30.2/SPRY domain
    Domain IPR003613 U box domain
    Domain IPR003877 SPRY domain
    Domain IPR003879 Butyrophylin-like, SPRY domain
    Domain IPR006574 SPRY-associated
    Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
    Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
    Conserved_site IPR017907 Zinc finger, RING-type, conserved site
    Domain IPR027370 RING-type zinc-finger, LisH dimerisation motif
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA trim35-31-201 (1)    Ensembl 1888
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM trim35-31 No data available
    MARKER RELATIONSHIPS
    trim35-31 Contained in: [BAC] CH73-264I18 (1), CH211-106H11 (1)
    trim35-31 Encodes: [cDNA] MGC:172130 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001110385 (1) 2081 bp
    Genomic GenBank:BX248081 (1) 174325 bp
    Select Tool
    Polypeptide UniProtKB:A8WG17 (1) 455 aa
    Sequence Information (all 11)
    ORTHOLOGY for trim35-31 ( Chr: 3 )
    CITATIONS (17)