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General Information
ZIRC
ZFIN ID: ZDB-GENE-060929-954
Gene Name: zgc:152670
Gene Symbol: zgc:152670
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Name: si:ch211-265g22.3

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to procollagen-proline 4-dioxygenase activity; predicted to be involved in peptidyl-proline hydroxylation to 4-hydroxy-L-proline; predicted to localize to the endoplasmic  ...

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:152670 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:152670 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process oxidation-reduction process (more)
Cellular Component endoplasmic reticulum (more)
Molecular Function iron ion binding (more)
GO Terms (all 9)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA zgc:152670-002 (1) 493
zgc:152670-003 (1) 528
mRNA zgc:152670-201 (1) 2890
zgc:152670-203 (1) 2377
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM zgc:152670 No data available
MARKER RELATIONSHIPS
zgc:152670Contained in: [BAC] CH211-265G22 (1) (order this)
zgc:152670Encodes: [cDNA] MGC:152670 (1) (order this)
zgc:152670Has Artifact: [EST] fd55g05
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001076655 (1) 2417bp
Genomic GenBank:BX005060 (1) 98512bp
Select Tool
Polypeptide UniProtKB:Q1RLP2 (1) 508aa
Sequence Clusters UniGene:78982 (1)
Sequence Information (all 18)
ORTHOLOGY for zgc:152670 (Chr: 2)
CITATIONS (13)