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ZIRC
ZFIN ID: ZDB-GENE-060929-840
Gene Name: XIAP associated factor 1
Gene Symbol: xaf1    Nomenclature History

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Previous Name: zgc:153893

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 15 Mapping Details/Browsers
Description: Predicted to have zinc ion binding activity. Predicted to be involved in apoptotic process. Orthologous to human XAF1 (XIAP associated factor 1).
Genome Resources: Alliance (1),  Gene:767709 (1),  Ensembl(GRCz11):ENSDARG00000068939 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa35908 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH xaf1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH xaf1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process apoptotic process (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001293 (1)
  • InterPro:IPR013083 (1)
  • InterPro:IPR031220 (1)
  • PROSITE:PS50145 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA xaf1-201 (1)    Ensembl 1410
    xaf1-203 (1)    Ensembl 726
    ncRNA xaf1-003 (1)    Ensembl 1208
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM xaf1 No data available
    MARKER RELATIONSHIPS
    xaf1 Contained in: [BAC] CH211-137A8 (1) (order this), DKEY-80G18 (1) (order this)
    xaf1 Encodes: [cDNA] MGC:153893 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001076647 (1) 1233 bp
    Genomic GenBank:BX537104 (1) 198108 bp
    Select Tool
    Polypeptide UniProtKB:Q08BZ9 (1) 273 aa
    Sequence Clusters UniGene:89531 (1)
    Sequence Information (all 16)
    ORTHOLOGY for xaf1 ( Chr: 15 )
    CITATIONS (15)