ZFIN ID: ZDB-GENE-060929-776
Gene Name: contactin 4
Gene Symbol: cntn4    Nomenclature History

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Previous Name: zgc:153573

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Orthologous to several human genes including CNTN4 (contactin 4).
Genome Resources: Alliance (1),  Gene:571349 (1),  Ensembl(GRCz11):ENSDARG00000098161 (1)
GENE EXPRESSION
All Expression Data: Fig. 3 from Gomez et al., 2012
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a358 Complex Unknown Unknown CRISPR
la015934Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20800 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cntn4
    2
    CRISPR2-cntn4 1
    CRISPR3-cntn4 1
    CRISPR4-cntn4 1
    CRISPR5-cntn4 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cntn4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cntn4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA bx942846.1-201 (1)    Ensembl 1497
    cntn4-202 (1)    Ensembl 2815
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cntn4 No data available
    MARKER RELATIONSHIPS
    cntn4 Contained in: [BAC] CH211-216C18 (1), CH211-230C4 (1), CH211-265O15 (1), RP71-85I8 (1)
    cntn4 Encodes: [cDNA] MGC:153573 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001080051 (1) 3463 nt
    Genomic RefSeq:NW_018394665 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:F1QGN2 (1) 1028 aa
    Sequence Information (all 29)
    ORTHOLOGY for cntn4 ( Chr: 6 )
    CITATIONS (23)