ZFIN ID: ZDB-GENE-060929-212
Gene Name: 3-oxoacid CoA transferase 1b
Gene Symbol: oxct1b    Nomenclature History

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Previous Names: wu:fb66a01, zgc:153275

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have 3-oxoacid CoA-transferase activity. Predicted to be involved in ketone body catabolic process. Predicted to localize to mitochondrion. Is expressed in liver and yolk syncytial layer. Orthologous to human OXCT1 (3-oxoacid CoA-transferase 1).
Genome Resources: Alliance (1),  Gene:560273 (1),  Ensembl(GRCz11):ENSDARG00000054319 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 12 figures (23 images) from Rauch et al., 2003 [fb66a01]
  7 figures (11 images) from Thisse et al., 2004 [IMAGE:7156121]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH oxct1b HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Succinyl CoA:3-oxoacid CoA transferase deficiency 245050
DISEASE ASSOCIATED WITH oxct1b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process ketone body catabolic process (more)
Cellular Component mitochondrion (more)
Molecular Function 3-oxoacid CoA-transferase activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA oxct1b-201 (1)    Ensembl 1956
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM oxct1b No data available
MARKER RELATIONSHIPS
oxct1b Contained in: [BAC] CH211-22D5
oxct1b Encodes: [EST] fb66a01 (order this), IMAGE:7156121 (1)
[cDNA] MGC:153275 (1), MGC:174215 (1), MGC:174596 (1), MGC:191863 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001077150 (1) 1929 nt
Genomic GenBank:BX530077 (1) 200625 nt Blast at MegaBLAST
Polypeptide UniProtKB:A8KBV1 (1) 526 aa
Sequence Information (all 21)
ORTHOLOGY for oxct1b ( Chr: 21 )
CITATIONS (25)