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ZIRC
ZFIN ID: ZDB-GENE-060929-1266
Gene Name: trafficking protein particle complex 2
Gene Symbol: trappc2
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:152903

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to localize to the nucleus. Human ortholog(s) of this gene implicated in spondyloepiphyseal dysplasia  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa38768 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH trappc2 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    spondyloepiphyseal dysplasia tarda Spondyloepiphyseal dysplasia tarda 313400
    DISEASE ASSOCIATED WITH trappc2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process endoplasmic reticulum to Golgi vesicle-mediated transport (more)
    Cellular Component nucleus (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR006722 (1)
  • InterPro:IPR011012 (1)
  • Pfam:PF04628 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA trappc2-001 (1) 513
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM trappc2 No data available
    MARKER RELATIONSHIPS
    trappc2Contained in: [Fosmid] CH1073-166J2 (1) (order this)
    trappc2Encodes: [cDNA] MGC:152903 (1), MGC:192500 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001320115 (1)
    Genomic GenBank:FO704820 (1) 37033bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IMU2 (1) 140aa
    Sequence Clusters UniGene:16486 (1)
    Sequence Information (all 18)
    ORTHOLOGY for trappc2 (Chr: 9)
    CITATIONS (20)