ZFIN ID: ZDB-GENE-060929-1250
Gene Name: coagulation factor XIII, A1 polypeptide a, tandem duplicate 1
Gene Symbol: f13a1a.1    Nomenclature History

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Previous Names: f13a1a, FXIIIa-42 (1), zgc:152982

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 24 Mapping Details/Browsers
Description: Predicted to have protein-glutamine gamma-glutamyltransferase activity. Predicted to be involved in blood coagulation, fibrin clot formation and peptide cross-linking. Human ortholog(s) of this gene implicated in artery disease (multiple); factor XIII deficiency; priapism; and thrombophilia (multiple). Orthologous to human F13A1 (coagulation factor XIII A chain).
Genome Resources: Alliance (1),  Gene:767742 (1),  Ensembl(GRCz11):ENSDARG00000045453 (1)
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa24434 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa30027 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44072 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45816 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-f13a1a.1
    1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH f13a1a.1 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    factor XIII deficiency Alliance Factor XIIIA deficiency 613225
    thrombophilia Alliance {Venous thrombosis, protection against} 188050
    {Myocardial infarction, protection against} 608446
    DISEASE ASSOCIATED WITH f13a1a.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process blood coagulation, fibrin clot formation (more)
    Cellular Component cellular_component (more)
    Molecular Function protein-glutamine gamma-glutamyltransferase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA f13a1a.1-201 (1)    Ensembl 3541
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM f13a1a.1 No data available
    MARKER RELATIONSHIPS
    f13a1a.1 Contained in: [BAC] CH211-67N24 (1), CH211-248P17 (1)
    f13a1a.1 Encodes: [cDNA] MGC:152982 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001076711 (1) 3634 nt
    Genomic GenBank:CR392025 (1) 158863 nt
    Select Tool
    Polypeptide UniProtKB:F1QC84 (1) 726 aa
    Sequence Information (all 13)
    ORTHOLOGY for f13a1a.1 ( Chr: 24 )
    CITATIONS (22)