Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-060825-7
Gene Name: acyl-CoA synthetase family member 2
Gene Symbol: acsf2
Previous Names: im:7145554, wu:fi49b09, zgc:152887
Location: Chr: 12   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7145554]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  unspecified
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: la012167Tg
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process fatty acid metabolic process (more)
Cellular Component mitochondrion (more)
Molecular Function (3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (ADP-forming) activity (more)
GO Terms (all 34)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000873 (1)
  • InterPro:IPR020845 (1)
  • InterPro:IPR025110 (1)
  • PROSITE:PS00455 (1)
  • Pfam:PF00501 (1)
  • Pfam:PF13193 (1)
  • EC:6.2.1.- (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA acsf2-001 (1) 2625
    acsf2-002 (1) 1050
    acsf2-003 (1) 608
    acsf2-004 (1) 671
    ncRNA acsf2-005 (1) 818
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM acsf2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    acsf2 Contained in: [BAC] DKEY-28D20, DKEY-57H18 (1), DKEY-287G12 (1)
    acsf2 Encodes: [EST] fi49b09, IMAGE:7145554 (1) (order this)
    [cDNA] MGC:152887 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001139438 (1) 2786 bp
    Genomic GenBank:BX530026 (1) 190980 bp
    Select Tool
    Polypeptide UniProtKB:F1R1C0 (1) 606 aa
    Sequence Clusters UniGene:79130 (1)
    Sequence Information (all 25)
    OTHER acsf2 GENE PAGES
  • Gene:751707 (1)
  • VEGA:OTTDARG00000027512 (1)
  • Ensembl(Zv9):ENSDARG00000061201 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish acsf2 12  
    Human ACSF2 17 (17q21.33)
  • OMIM:610465
  • Gene:80221
  • Orthology Details
    CITATIONS (21)