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General Information
ZIRC
ZFIN ID: ZDB-GENE-060825-333
Gene Name: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a
Gene Symbol: ctdspla
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fj98d02, zgc:153196

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(Including Attributions)
Location: Chr: 24 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human CTDSPL (CTD small  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10650 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ctdspla HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ctdspla VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription by RNA polymerase II (more)
    Cellular Component cellular_component (more)
    Molecular Function phosphatase activity (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ctdspla-002 (1) 1551
    ctdspla-003 (1) 792
    ctdspla-004 (1) 461
    ctdspla-005 (1) 369
    mRNA ctdspla-201 (1) 1914
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ctdspla No data available
    MARKER RELATIONSHIPS
    ctdsplaContained in: [BAC] DKEY-246L21 (order this), DKEY-276I5 (1) (order this)
    ctdsplaEncodes: [EST] fj98d02
    [cDNA] MGC:153196 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045447 (1) 1566bp
    Genomic GenBank:BX571770 (1) 166454bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IC10 (1) 276aa
    Sequence Clusters UniGene:132719 (1)
    Sequence Information (all 20)
    ORTHOLOGY for ctdspla (Chr: 24)
    CITATIONS (16)