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ZIRC
ZFIN ID: ZDB-GENE-060810-185
Gene Name: mediator of DNA damage checkpoint 1
Gene Symbol: mdc1    Nomenclature History

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Previous Names: im:7163673 (1), sb:eu278, si:ch73-309n4.5

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 16 Mapping Details/Browsers
Description: Orthologous to human MDC1 (mediator of DNA damage checkpoint 1).
Genome Resources: Alliance (1),  Gene:569805 (1),  Ensembl(GRCz11):ENSDARG00000086764 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu278]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7163673]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa4640 Point Mutation Unknown Premature Stop ENU
sa6411 Point Mutation Unknown Premature Stop ENU
sa36050 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36051 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH mdc1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH mdc1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    GO Terms (all 1)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA mdc1-202 (1)    Ensembl 5527
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM mdc1 No data available
    MARKER RELATIONSHIPS
    mdc1 Contained in: [BAC] CH73-309N4 (1) (order this)
    [Fosmid] CH1073-277P1 (1) (order this)
    mdc1 Encodes: [EST] eu278 (1), IMAGE:7163673 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001365560 (1)
    Genomic GenBank:FP016064 (1) 84355 bp
    Select Tool
    Polypeptide UniProtKB:E7FA74 (1) 1914 aa
    Sequence Information (all 19)
    ORTHOLOGY for mdc1 ( Chr: 16 )
    CITATIONS (14)