ZFIN is now using GRCz12tu for Genomic Data
Gene
tbc1d1
- ID
- ZDB-GENE-060710-1
- Name
- TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
- Symbol
- tbc1d1 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Orthologous to human TBC1D1 (TBC1 domain family member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000195 | Rab-GAP-TBC domain |
| Domain | IPR006020 | PTB/PI domain |
| Domain | IPR021785 | Domain of unknown function DUF3350 |
| Family | IPR050302 | Rab GTPase-activating TBC domain-containing protein |
| Homologous_superfamily | IPR011993 | PH-like domain superfamily |
| Homologous_superfamily | IPR035969 | Rab-GAP-TBC domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Domain of unknown function DUF3350 | PH-like domain superfamily | PTB/PI domain | Rab-GAP-TBC domain | Rab-GAP-TBC domain superfamily | Rab GTPase-activating TBC domain-containing protein |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8N7UT15 | InterPro | 1203 | ||||||
| UniProtKB:A0A8M9QE63 | InterPro | 1236 | ||||||
| UniProtKB:A0A8M2BFN8 | InterPro | 1276 | ||||||
| UniProtKB:A0A8M9Q8V8 | InterPro | 1115 | ||||||
| UniProtKB:A0A8M2BGB4 | InterPro | 1130 | ||||||
| UniProtKB:A0AB32TDZ8 | InterPro | 1057 | ||||||
| UniProtKB:A0AB32TDZ9 | InterPro | 1090 | ||||||
| UniProtKB:A0AB32TQT5 | InterPro | 1151 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
tbc1d1-201
(1)
|
Ensembl | 5,011 nt | ||
| mRNA |
tbc1d1-204
(1)
|
Ensembl | 4,891 nt | ||
| mRNA |
tbc1d1-205
(1)
|
Ensembl | 4,792 nt | ||
| mRNA |
tbc1d1-206
(1)
|
Ensembl | 6,261 nt | ||
| mRNA |
tbc1d1-207
(1)
|
Ensembl | 3,555 nt | ||
| mRNA |
tbc1d1-208
(1)
|
Ensembl | 6,162 nt | ||
| ncRNA |
tbc1d1-003
(1)
|
Ensembl | 959 nt | ||
| ncRNA |
tbc1d1-004
(1)
|
Ensembl | 399 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers