ZFIN ID: ZDB-GENE-060616-217
Gene Name: topoisomerase (DNA) I, like
Gene Symbol: top1l
Previous Names: wu:fc66a02, zgc:136349
Location: Chr: 11 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898978]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la017797Tg Transgenic Insertion Unknown Unknown DNA
la017798Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH top1l HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process DNA topological change (more)
Cellular Component chromosome (more)
Molecular Function DNA binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001631 (1)
  • InterPro:IPR008336 (1)
  • InterPro:IPR011010 (1)
  • InterPro:IPR013030 (1)
  • InterPro:IPR013034 (1)
  • InterPro:IPR013499 (1)
  • InterPro:IPR013500 (1)
  • InterPro:IPR014711 (1)
  • InterPro:IPR014727 (1)
  • InterPro:IPR018521 (1)
  • InterPro:IPR025834 (1)
  • PROSITE:PS00176 (1)
  • Pfam:PF01028 (1)
  • Pfam:PF02919 (1)
  • Pfam:PF14370 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA top1l-001 (1) 3795
    ncRNA top1l-002 (1) 580
    mRNA top1l-005 (1) 759
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM top1l No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    top1lContained in: [BAC] CH211-232B12 (1) (order this)
    top1lEncodes: [EST] fc66a02, IMAGE:6898978 (1) (order this)
    [cDNA] MGC:136349 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044324 (1) 3798bp
    Genomic GenBank:CR548630 (1) 117408bp
    Select Tool
    Polypeptide UniProtKB:Q1ED17 (1) 758aa
    Sequence Clusters UniGene:67676 (1)
    Sequence Information (all 18)
    OTHER top1l GENE PAGES
  • Gene:553496 (1)
  • VEGA:OTTDARG00000022487 (1)
  • Ensembl(GRCz10):ENSDARG00000070545 (1)
  • ORTHOLOGY for top1l (Chr: 11)No data available
    CITATIONS (20)