Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-060616-217
Gene Name: topoisomerase (DNA) I, like
Gene Symbol: top1l
Previous Names: wu:fc66a02, zgc:136349
Location: Chr: 11   Details
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898978]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Alleles: la017797Tg, la017798Tg
PHENOTYPE No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process DNA topological change (more)
Cellular Component chromosome (more)
Molecular Function DNA binding (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001631 (1)
  • InterPro:IPR008336 (1)
  • InterPro:IPR011010 (1)
  • InterPro:IPR013030 (1)
  • InterPro:IPR013034 (1)
  • InterPro:IPR013499 (1)
  • InterPro:IPR013500 (1)
  • InterPro:IPR014711 (1)
  • InterPro:IPR014727 (1)
  • InterPro:IPR018521 (1)
  • InterPro:IPR025834 (1)
  • PROSITE:PS00176 (1)
  • Pfam:PF01028 (1)
  • Pfam:PF02919 (1)
  • Pfam:PF14370 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA top1l-001 (1) 3798
    ncRNA top1l-002 (1) 580
    GENE PRODUCT DESCRIPTION No description available
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM top1l No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    top1l Contained in: [BAC] CH211-232B12 (1) (order this)
    top1l Encodes: [EST] fc66a02, IMAGE:6898978 (1) (order this)
    [cDNA] MGC:136349 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044324 (1) 3798 bp
    Genomic GenBank:CR548630 (1) 117408 bp
    Select Tool
    Polypeptide UniProtKB:Q1ED17 (1) 758 aa
    Sequence Clusters UniGene:67676 (1)
    Sequence Information (all 23)
    OTHER top1l GENE PAGES
  • Gene:553496 (1)
  • VEGA:OTTDARG00000022487 (1)
  • Ensembl(Zv9):ENSDARG00000070545 (1)
  • ORTHOLOGY No data available
    CITATIONS (19)