ZFIN ID: ZDB-GENE-060531-95
Gene Name: transient receptor potential cation channel, subfamily M, member 3
Gene Symbol: trpm3    Nomenclature History

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Previous Name: si:dkey-201c13.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have calcium activated cation channel activity. Predicted to be involved in several processes, including detection of temperature stimulus; protein tetramerization; and sensory perception of temperature stimulus. Predicted to localize to the integral component of membrane. Is expressed in brain; eye; integument; neural crest cell; and solid lens vesicle. Orthologous to human TRPM3 (transient receptor potential cation channel subfamily M member 3).
Genome Resources: Alliance (1),  Gene:565807 (1),  Ensembl(GRCz11):ENSDARG00000039181 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6977 Point Mutation Unknown Premature Stop ENU
sa14345 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18207 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20416 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH trpm3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH trpm3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cation transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium activated cation channel activity (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR005821 Ion transport domain
    Domain IPR032415 TRPM, tetramerisation domain
    Domain IPR041491 TRPM, SLOG domain
    Family IPR029583 Transient receptor potential cation channel subfamily M member 3
    Homologous_superfamily IPR037162 TRPM, tetramerisation domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA trpm3-202 (1)    Ensembl 5205
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM trpm3 No data available
    MARKER RELATIONSHIPS
    trpm3 Contained in: [BAC] DKEY-148E22 (1) (order this), DKEY-201C13 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_005171931 (1) 7279 nt
    Genomic GenBank:BX323080 (1) 146204 nt
    Select Tool
    Polypeptide UniProtKB:A2BGS8 (1) 1734 aa
    Sequence Information (all 38)
    ORTHOLOGY for trpm3 ( Chr: 5 )
    CITATIONS (19)