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ZIRC
ZFIN ID: ZDB-GENE-060526-72
Gene Name: SET binding protein 1
Gene Symbol: setbp1
Sequence Ontology ID : SO:0000704

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Previous Name: si:ch211-198e13.1

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 29. Orthologous to human SETBP1 (SET binding protein 1).
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029124Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8440 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH setbp1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    autosomal dominant non-syndromic intellectual disability 29 Mental retardation, autosomal dominant 29 616078
    Schinzel-Giedion midface retraction syndrome 269150
    DISEASE ASSOCIATED WITH setbp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function DNA binding (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR017956 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA setbp1-201 (1) 4966
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM setbp1 No data available
    MARKER RELATIONSHIPS
    setbp1Contained in: [BAC] CH211-198E13 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005165675 (1)
    Genomic GenBank:AL935198 (1) 200697bp Blast at MegaBLAST
    Polypeptide UniProtKB:B0R147 (1) 1438aa
    Sequence Information (all 5)
    ORTHOLOGY for setbp1 (Chr: 5)
    CITATIONS (15)