ZFIN ID: ZDB-GENE-060526-60
Gene Name: ARVCF delta catenin family member b
Gene Symbol: arvcfb
Sequence Ontology ID : SO:0000704

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Previous Names: si:ch211-173n20.1 (1), wu:fc11a08

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Hsu et al., 2012
Wild-type Stages, Structures: Blastula:512-cell (2.75h-3.0h) to Segmentation:10-13 somites (14.0h-16.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024927Tg Transgenic Insertion Unknown Unknown DNA
la024928Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13911 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33605 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33606 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH arvcfb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH arvcfb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (more)
    Cellular Component cytoplasm (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000225 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR028435 (1)
  • InterPro:IPR028444 (1)
  • PROSITE:PS50176 (1)
  • Pfam:PF00514 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arvcfb-001 (1) 9165
    arvcfb-002 (1) 679
    ncRNA arvcfb-003 (1) 610
    mRNA arvcfb-004 (1) 575
    arvcfb-005 (1) 763
    arvcfb-006 (1) 774
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM arvcfb No data available
    MARKER RELATIONSHIPS
    arvcfbContained in: [BAC] CH211-173N20 (1) (order this), CH211-214J8 (1) (order this), DKEY-97G11 (1) (order this), DKEY-104K17 (1) (order this)
    arvcfbEncodes: [EST] fc11a08
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001128534 (1) 2961bp
    Genomic GenBank:BX510923 (1) 165838bp
    Select Tool
    Polypeptide UniProtKB:A2BGY1 (1) 986aa
    Sequence Clusters UniGene:77921 (1)
    Sequence Information (all 52)
    OTHER arvcfb GENE PAGES
  • Alliance (1)
  • Gene:564669 (1)
  • VEGA:OTTDARG00000016423 (1)
  • Ensembl(GRCz11):ENSDARG00000061688 (2)
  • ORTHOLOGY for arvcfb (Chr: 5)
    CITATIONS (21)