ZFIN is now using GRCz12tu for Genomic Data
Gene
alkbh4
- ID
- ZDB-GENE-060526-275
- Name
- alkB homolog 4, lysine demthylase
- Symbol
- alkbh4 Nomenclature History
- Previous Names
-
- si:dkey-261j4.10
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable 2-oxoglutarate-dependent dioxygenase activity and demethylase activity. Acts upstream of or within regulation of actomyosin structure organization. Predicted to be active in contractile ring and midbody. Is expressed in blastomere; forebrain; midbrain; oocyte; and otic vesicle. Orthologous to human ALKBH4 (alkB homolog 4, lysine demethylase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from Sun et al., 2017
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 3 figures from Sun et al., 2017
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Alpha-ketoglutarate-dependent dioxygenase alkB homologue 4 | Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily |
|---|---|---|---|---|
| UniProtKB:A0A2R8RZS3 | InterPro | 188 | ||
| UniProtKB:A0A8M1P7U9 | InterPro | 268 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
alkbh4-201
(1)
|
Ensembl | 957 nt | ||
| mRNA |
alkbh4-202
(1)
|
Ensembl | 922 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers