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ZIRC
ZFIN ID: ZDB-GENE-060526-12
Gene Name: AT rich interactive domain 3C (BRIGHT-like)
Gene Symbol: arid3c    Nomenclature History

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Previous Name: si:ch211-113n10.6

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to localize to the cytoplasm and nucleus. Orthologous to human ARID3C (AT-rich interaction domain 3C).
Genome Resources: Alliance (1),  Gene:569444 (1),  Ensembl(GRCz11):ENSDARG00000067729 (1)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015690Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-arid3c N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH arid3c HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH arid3c VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cytoplasm (more)
    Molecular Function DNA binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA arid3c-201 (1)    Ensembl 2286
    ncRNA arid3c-002 (1)    Ensembl 890
    arid3c-003 (1)    Ensembl 472
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM arid3c No data available
    MARKER RELATIONSHIPS
    arid3c Contained in: [BAC] CH211-113N10 (1) (order this), DKEY-199L1 (1) (order this)
    arid3c Encodes: [EST] wz13108 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001100039 (1) 1713 bp
    Genomic GenBank:BX005419 (1) 179474 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IS23 (1) 599 aa
    Sequence Clusters UniGene:106046 (1)
    Sequence Information (all 14)
    ORTHOLOGY for arid3c ( Chr: 5 )
    CITATIONS (18)