ZFIN ID: ZDB-GENE-060526-109
Gene Name: tet methylcytosine dioxygenase 3
Gene Symbol: tet3
Sequence Ontology ID : SO:0000704

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Previous Name: si:ch211-220a11.1 (1)

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits methylcytosine dioxygenase activity; involved in several processes, including cell surface receptor signaling pathway, cellular response to lipopolysaccharide, and endothelial to  ...
GENE EXPRESSION
All Expression Data: 9 figures from 7 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
au60 Indel Exon 6 Frameshift, Premature Stop TALEN
ihb2020 Insertion Exon 2 Unknown TALEN
mk18 Small Deletion Unknown Frameshift, Premature Stop TALEN
sa9686 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16660 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33552 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tet3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tet3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell morphogenesis involved in differentiation (more)
    Molecular Function methylcytosine dioxygenase activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002857 (1)
  • InterPro:IPR024779 (1)
  • InterPro:IPR040175 (1)
  • PROSITE:PS51058 (1)
  • Pfam:PF02008 (1)
  • Pfam:PF12851 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tet3-001 (1) 3497
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tet3 No data available
    MARKER RELATIONSHIPS
    tet3Contained in: [BAC] CH211-185J11 (1) (order this), CH211-220A11 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082905 (1)
    Genomic GenBank:CR388049 (1) 201176bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8Q4R6 (1) 2052aa
    Sequence Information (all 20)
    OTHER tet3 GENE PAGES
  • Alliance (1)
  • Gene:103283056 (1)
  • VEGA:OTTDARG00000015864 (1)
  • Ensembl(GRCz11):ENSDARG00000062646 (2)
  • ORTHOLOGY for tet3 (Chr: 5)
    CITATIONS (33)