ZFIN ID: ZDB-GENE-060512-114
Gene Name: plakophilin 3a
Gene Symbol: pkp3a    Nomenclature History

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Previous Names: pkp3, wu:fa97f09, wu:fk69a12, zgc:136656

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 25 Mapping Details/Browsers
Description: Predicted to have cadherin binding activity. Predicted to be involved in cell-cell adhesion and cell-cell junction assembly. Predicted to localize to several cellular components, including adherens junction; nucleus; and plasma membrane. Is expressed in spinal cord. Orthologous to human PKP3 (plakophilin 3).
Genome Resources: Alliance (1),  Gene:368397 (1),  Ensembl(GRCz11):ENSDARG00000051861 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa5999 Point Mutation Unknown Premature Stop ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pkp3a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pkp3a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cell adhesion (more)
Cellular Component desmosome (more)
Molecular Function cadherin binding (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pkp3a-201 (1)    Ensembl 1017
pkp3a-202 (1)    Ensembl 3929
pkp3a-203 (1)    Ensembl 394
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pkp3a No data available
MARKER RELATIONSHIPS
pkp3a Contained in: [BAC] CH211-121J13 (1), DKEYP-91C1 (1)
pkp3a Encodes: [EST] fa97f09, fk69a12
[cDNA] MGC:136656 (1), MGC:174236 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001045280 (1) 3910 nt
Genomic GenBank:AL929050 (1) 196743 nt
Select Tool
Polypeptide UniProtKB:F1Q8J9 (1) 869 aa
Sequence Information (all 26)
ORTHOLOGY for pkp3a ( Chr: 25 )
CITATIONS (22)