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General Information
ZIRC
ZFIN ID: ZDB-GENE-060503-709
Gene Name: thrombospondin, type I, domain containing 7Aa
Gene Symbol: thsd7aa    Nomenclature History

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Previous Names: thsd7a, si:dkey-12h3.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Involved in several processes, including axon extension; glomerular filtration; and glomerular visceral epithelial cell development. Predicted to localize to the plasma membrane. Is expressed in nervous system; neural tube; and pectoral fin. Orthologous to human THSD7A (thrombospondin type 1 domain containing 7A).
Genome Resources: Alliance (1),  Gene:557991 (1),  Ensembl(GRCz11):ENSDARG00000061479 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020806Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8458 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa15977 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36889 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39256 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-thsd7aa N/A 2
    MO2-thsd7aa N/A 2
    MO3-thsd7aa N/A 1
    DISEASE ASSOCIATED WITH thsd7aa HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH thsd7aa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process angiogenesis (more)
    Cellular Component cell projection (more)
    GO Terms (all 14)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000884 (1)
  • InterPro:IPR036383 (1)
  • PROSITE:PS50092 (1)
  • Pfam:PF00090 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA thsd7aa-201 (1)    Ensembl 4904
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM thsd7aa
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    TgBAC(thsd7aa:GFP) thsd7aa GFP Danio rerio 1 1
    MARKER RELATIONSHIPS
    thsd7aa Contained in: [BAC] DKEY-12H3 (1) (order this), DKEY-108G22 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001122760 (1) 5424 bp
    Genomic GenBank:CR381594 (1) 182645 bp
    Select Tool
    Polypeptide UniProtKB:A7MBS7 (1) 1686 aa
    Sequence Clusters UniGene:119387 (1)
    Sequence Information (all 21)
    ORTHOLOGY for thsd7aa ( Chr: 19 )
    CITATIONS (22)