ZFIN is now using GRCz12tu for Genomic Data
Gene
galnt12
- ID
- ZDB-GENE-060503-704
- Name
- UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12
- Symbol
- galnt12 Nomenclature History
- Previous Names
-
- si:ch211-9n13.2
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable polypeptide N-acetylgalactosaminyltransferase activity. Predicted to be involved in protein O-linked glycosylation. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to human GALNT12 (polypeptide N-acetylgalactosaminyltransferase 12).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| {Colorectal cancer, susceptibility to, 1} | 608812 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Glycosyltransferase 2-like | N-acetylgalactosaminyltransferase | Nucleotide-diphospho-sugar transferases | Ricin B, lectin domain | Ricin B-like lectins |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8N7TDK4 | InterPro | 578 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
galnt12-201
(1)
|
Ensembl | 1,566 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers