ZFIN ID: ZDB-GENE-060503-54
Gene Name: leucine rich repeat and Ig domain containing 3a
Gene Symbol: lingo3a    Nomenclature History

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Previous Name: si:dkey-172o19.1 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to localize to extracellular matrix and extracellular space. Is expressed in basal plate midbrain region; brain; otic vesicle; peripheral olfactory organ; and somite. Orthologous to human LINGO3 (leucine rich repeat and Ig domain containing 3).
Genome Resources: Alliance (1),  Gene:567293 (1),  Ensembl(GRCz11):ENSDARG00000061970 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa24158 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH lingo3a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lingo3a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lingo3a-201 (1)    Ensembl 1818
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lingo3a No data available
    MARKER RELATIONSHIPS
    lingo3a Contained in: [BAC] DKEY-172O19 (1) (order this)
    lingo3a Encodes: [EST] cssl:d0353 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001082854 (1) 1818 nt
    Genomic GenBank:BX324170 (1) 181536 nt
    Select Tool
    Polypeptide UniProtKB:M9MM99 (1) 605 aa
    Sequence Information (all 16)
    ORTHOLOGY for lingo3a ( Chr: 22 )
    CITATIONS (20)