ZFIN ID: ZDB-GENE-060503-333
Gene Name: chloride channel, voltage-sensitive 1a
Gene Symbol: clcn1a
Previous Name: si:dkey-14o18.5 (1)
Location: Chr: 19   Details
Nomenclature History
GENE EXPRESSION No data available
MUTANTS AND TARGETED KNOCKDOWNS

Allele Type Mutagen Suppliers
sa10992 Point Mutation ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12840 Point Mutation ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa16717 Point Mutation ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa17158 Point Mutation ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa23449 Point Mutation ENU
    PHENOTYPE
    Phenotype of Human Orthologue OMIM Phenotype ID
    Myotonia congenita, dominant 160800
    Myotonia congenita, recessive 255700
    Myotonia levior, recessive
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chloride transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function ion channel activity (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000644 (1)
  • InterPro:IPR001807 (1)
  • InterPro:IPR014743 (1)
  • PROSITE:PS51371 (1)
  • Pfam:PF00571 (1)
  • Pfam:PF00654 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA clcn1a-001 (1) 3951
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM clcn1a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    clcn1a Contained in: [BAC] DKEY-14O18 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082910 (1) 2923 bp
    Genomic GenBank:BX927218 (1) 208809 bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1Q5M3 (1) 1011 aa
    Sequence Clusters UniGene:140226 (1)
    Sequence Information (all 8)
    OTHER clcn1a GENE PAGES
  • Gene:795133 (1)
  • VEGA:OTTDARG00000014838 (1)
  • Ensembl(Zv9):ENSDARG00000062084 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish clcn1a 19  
    Human CLCN1 7 (7q35)
  • OMIM:118425
  • Gene:1180
  • Mouse Clcn1 6 ( 20.57 cM)
  • MGI:88417
  • Gene:12723
  • Orthology Details
    CITATIONS (12)