header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-060503-321
Gene Name: nucleolar protein with MIF4G domain 1
Gene Symbol: nom1    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: si:ch211-266o5.1

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Involved in ribosome biogenesis. Predicted to localize to the nucleolus. Is expressed in brain; intestine; liver; and pancreas. Orthologous to human NOM1 (nucleolar protein with MIF4G domain 1).
Genome Resources: Alliance (1),  Gene:557585 (1),  Ensembl(GRCz11):ENSDARG00000060027 (1)
GENE EXPRESSION
All Expression Data: Fig. 3 from Qin et al., 2014
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029347Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8417 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31587 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40973 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zf591 Small Deletion Unknown Unknown
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-nom1 N/A 1
    MO2-nom1 N/A 1
    DISEASE ASSOCIATED WITH nom1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nom1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ribosome biogenesis (more)
    Cellular Component nucleolus (more)
    Molecular Function RNA binding (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nom1-201 (1)    Ensembl 1987
    nom1-202 (1)    Ensembl 2832
    ncRNA nom1-003 (1)    Ensembl 445
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM nom1 No data available
    MARKER RELATIONSHIPS
    nom1 Contained in: [BAC] CH211-266O5 (1) (order this)
    nom1 Encodes: [cDNA] MGC:162006 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044832 (1) 1875 bp
    Genomic GenBank:BX247878 (1) 190715 bp
    Select Tool
    Polypeptide UniProtKB:Q1LY17 (1) 835 aa
    Sequence Clusters UniGene:80088 (1)
    Sequence Information (all 18)
    ORTHOLOGY for nom1 ( Chr: 7 )
    CITATIONS (21)