ZFIN ID: ZDB-GENE-060503-321
Gene Name: nucleolar protein with MIF4G domain 1
Gene Symbol: nom1
Sequence Ontology ID : SO:0000704

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Previous Name: si:ch211-266o5.1

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity; involved in ribosome biogenesis; predicted to localize to the nucleolus; orthologous to human NOM1 (nucleolar protein with MIF4G domain 1).
GENE EXPRESSION
All Expression Data: Fig. 3 from Qin et al., 2014
Wild-type Stages, Structures: Cleavage:4-cell (1.0h-1.25h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029347Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa8417 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31587 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40973 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zf591 Small Deletion Unknown Unknown
    Targeting reagents:
    PHENOTYPE
    Data: 5 figures from Qin et al., 2014
    Observed in:
    DISEASE ASSOCIATED WITH nom1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nom1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ribosome biogenesis (more)
    Cellular Component nucleolus (more)
    Molecular Function RNA binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR003890 (1)
  • InterPro:IPR003891 (1)
  • InterPro:IPR016021 (1)
  • InterPro:IPR016024 (1)
  • PROSITE:PS51366 (1)
  • Pfam:PF02847 (1)
  • Pfam:PF02854 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nom1-001 (1) 1987
    nom1-002 (1) 2832
    ncRNA nom1-003 (1) 445
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nom1 No data available
    MARKER RELATIONSHIPS
    nom1Contained in: [BAC] CH211-266O5 (1) (order this)
    nom1Encodes: [cDNA] MGC:162006 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044832 (1) 1875bp
    Genomic GenBank:BX247878 (1) 190715bp
    Select Tool
    Polypeptide UniProtKB:Q1LY17 (1) 835aa
    Sequence Clusters UniGene:80088 (1)
    Sequence Information (all 18)
    OTHER nom1 GENE PAGES
  • Alliance (1)
  • Gene:557585 (1)
  • VEGA:OTTDARG00000011644 (1)
  • ORTHOLOGY for nom1 (Chr: 7)
    CITATIONS (20)