ZFIN ID: ZDB-GENE-060503-289
Gene Name: leucine rich repeat containing 47
Gene Symbol: lrrc47    Nomenclature History

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Previous Names: fe50f06, si:ch211-147a11.7 (1), wu:fe50f06 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have RNA binding activity and phenylalanine-tRNA ligase activity. Orthologous to human LRRC47 (leucine rich repeat containing 47).
Genome Resources: Alliance (1),  Gene:553404 (1),  Ensembl(GRCz11):ENSDARG00000053138 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH lrrc47 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH lrrc47 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Molecular Function phenylalanine-tRNA ligase activity (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA lrrc47-201 (1)    Ensembl 2177
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM lrrc47 No data available
MARKER RELATIONSHIPS
lrrc47 Contained in: [BAC] CH211-147A11 (1), DKEY-23C22 (1) (order this)
lrrc47 Encodes: [EST] fe50f06
[cDNA] MGC:172029 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001110372 (1) 1839 nt
Genomic GenBank:CR352301 (1) 176256 nt
Select Tool
Polypeptide UniProtKB:F1QAF8 (1) 575 aa
Sequence Information (all 21)
ORTHOLOGY for lrrc47 ( Chr: 8 )
CITATIONS (19)