ZFIN ID: ZDB-GENE-060503-286
Gene Name: cadherin 13, H-cadherin (heart)
Gene Symbol: cdh13    Nomenclature History

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Previous Name: si:ch211-122a20.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have cadherin binding activity and calcium ion binding activity. Involved in apoptotic process involved in blood vessel morphogenesis. Predicted to localize to adherens junction and catenin complex. Human ortholog(s) of this gene implicated in breast cancer (multiple); lung non-small cell carcinoma; reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human CDH13 (cadherin 13).
Genome Resources: Alliance (1),  Gene:558732 (1),  Ensembl(GRCz11):ENSDARG00000014215 (2)
GENE EXPRESSION
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23253 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-cdh13 N/A 1
    MO2-cdh13 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cdh13 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cdh13 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process apoptotic process involved in blood vessel morphogenesis (more)
    Cellular Component membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cdh13-201 (1)    Ensembl 2705
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdh13 No data available
    MARKER RELATIONSHIPS
    cdh13 Contained in: [BAC] CH73-124C24 (1), CH211-118E11 (1), CH211-122A20 (1), DKEY-283N16 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_017352056 (1)
    Genomic GenBank:BX649568 (1) 194885 nt
    Select Tool
    Polypeptide UniProtKB:F1R6D1 (1) 661 aa
    Sequence Information (all 28)
    ORTHOLOGY for cdh13 ( Chr: 18 )
    CITATIONS (20)