ZFIN ID: ZDB-GENE-060503-139
Gene Name: transglutaminase 1 like 1
Gene Symbol: tgm1l1

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Attributions

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Previous Names: TG1-81 (1), si:ch211-9d9.3

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Deasey et al., 2011
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
  muscle, notochord, whole organism
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9251 Point Mutation Unknown Premature Stop ENU
sa12888 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tgm1l1 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peptide cross-linking (more)
    Molecular Function protein-glutamine gamma-glutamyltransferase activity (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR013808 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • PROSITE:PS00547 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tgm1l1-001 (1) 2685
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tgm1l1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    tgm1l1Contained in: [BAC] CH211-9D9 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_689858 (1) 2758bp
    Genomic GenBank:AL929335 (1) 173236bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IN46 (1) 816aa
    Sequence Clusters UniGene:155825 (1)
    Sequence Information (all 8)
    OTHER tgm1l1 GENE PAGES
  • Gene:566581 (1)
  • VEGA:OTTDARG00000018074 (1)
  • Ensembl(GRCz10):ENSDARG00000102106 (1)
  • ORTHOLOGY for tgm1l1 (Chr: 2)No data available
    CITATIONS (10)