ZFIN ID: ZDB-GENE-060503-139
Gene Name: transglutaminase 1 like 1
Gene Symbol: tgm1l1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: TG1-81 (1), si:ch211-9d9.3

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from Deasey et al., 2012
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa9251 Point Mutation Unknown Premature Stop ENU
sa12888 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tgm1l1 HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process peptide cross-linking (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR013808 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • InterPro:IPR036238 (1)
  • InterPro:IPR036985 (1)
  • PROSITE:PS00547 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tgm1l1-001 (1) 2685
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tgm1l1 No data available
    MARKER RELATIONSHIPS
    tgm1l1Contained in: [BAC] CH211-9D9 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_689858 (1) 3402bp
    Genomic GenBank:AL929335 (1) 173236bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IN46 (1) 816aa
    Sequence Clusters UniGene:155825 (1)
    Sequence Information (all 9)
    OTHER tgm1l1 GENE PAGES
  • Alliance (1)
  • Gene:566581 (1)
  • VEGA:OTTDARG00000018074 (1)
  • Ensembl(GRCz10):ENSDARG00000102106 (1)
  • ORTHOLOGY for tgm1l1 (Chr: 2)
    CITATIONS (12)