ZFIN ID: ZDB-GENE-060503-100
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Gene Name: si:ch211-12m10.1
Gene Symbol: si:ch211-12m10.1    Nomenclature History

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Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have serine-type endopeptidase activity. Predicted to be involved in signal transduction. Predicted to localize to the integral component of plasma membrane.
Genome Resources: Alliance (1),  Gene:568845 (1),  Ensembl(GRCz11):ENSDARG00000011171 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021969Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • la021970Tg Transgenic Insertion Unknown Unknown DNA
    sa9107 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa10500 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa12677 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa13815 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa14272 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa15048 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa23981 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa23982 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa37350 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa43678 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa45742 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-12m10.1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-12m10.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process signal transduction (more)
    Cellular Component integral component of membrane (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR000742 EGF-like domain
    Repeat IPR006530 YD repeat
    Homologous_superfamily IPR008969 Carboxypeptidase-like, regulatory domain superfamily
    Domain IPR009471 Teneurin intracellular, N-terminal
    Homologous_superfamily IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase
    Homologous_superfamily IPR011042 Six-bladed beta-propeller, TolB-like
    Conserved_site IPR013032 EGF-like, conserved site
    Domain IPR013111 EGF-like domain, extracellular
    Domain IPR022385 Rhs repeat-associated core
    Family IPR027689 Teneurin-2/3
    Domain IPR028916 Tox-GHH domain
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA si:ch211-12m10.1-202 (1)    Ensembl 7748
    Select Tool
    Browsers: NCBI,  Ensembl,  ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-12m10.1 No data available
    MARKER RELATIONSHIPS
    si:ch211-12m10.1 Contained in: [BAC] CH211-12M10 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005159578 (1) 8946 bp
    Select Tool
    Genomic GenBank:BX001038 (1) 180659 bp
    Select Tool
    Polypeptide UniProtKB:F1Q4Y7 (1) 2735 aa
    Select Tool
    Sequence Information (all 22)
    ORTHOLOGY for si:ch211-12m10.1 ( Chr: 21 )
    CITATIONS (17)