ZFIN ID: ZDB-GENE-060421-4592
Gene Name: keratin 93
Gene Symbol: krt93    Nomenclature History

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Previous Names: krtt1c11a (1), wu:fa96h10, zgc:136902 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to have structural molecule activity. Predicted to localize to the intermediate filament. Human ortholog(s) of this gene implicated in epidermolytic palmoplantar keratoderma and hereditary mucosal leukokeratosis. Is expressed in jaw row breeding tubercle. Orthologous to several human genes including KRT13 (keratin 13); KRT15 (keratin 15); and KRT24 (keratin 24).
Genome Resources: Alliance (1),  Gene:678611 (1),  Ensembl(GRCz11):ENSDARG00000044976 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Fischer et al., 2014
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH krt93 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH krt93 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component intermediate filament (more)
Molecular Function structural molecule activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Conserved_site IPR018039 Intermediate filament protein, conserved site
Domain IPR039008 Intermediate filament, rod domain
Family IPR002957 Keratin, type I
Homologous_superfamily IPR042180 Intermediate filament, rod domain, coil 1B
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA krt93-201 (1)    Ensembl 1622
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM krt93 No data available
MARKER RELATIONSHIPS
krt93 Contained in: [BAC] DKEY-23F9 (1) (order this)
krt93 Encodes: [EST] fa96h10
[cDNA] MGC:136902 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001040359 (1) 1693 nt
Genomic GenBank:BX324177 (1) 235038 nt Blast at MegaBLAST
Polypeptide UniProtKB:Q1RLR3 (1) 462 aa
Sequence Information (all 12)
ORTHOLOGY for krt93 ( Chr: 11 )
CITATIONS (22)