ZFIN ID: ZDB-GENE-060421-3623
Gene Name: paired-like homeodomain 1
Gene Symbol: pitx1
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:136976 (1)

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Days 21-29 (21d-30d, 7.8mm, 10 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pitx1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
clubfoot Clubfoot, congenital, with or without deficiency of long bones and/or mirror-image polydactyly 119800
Liebenberg syndrome 186550
DISEASE ASSOCIATED WITH pitx1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process multicellular organism development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR003654 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR016233 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • PROSITE:PS50803 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF03826 (1)
  • TRANSCRIPTS No data available
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pitx1 No data available
    MARKER RELATIONSHIPS
    pitx1Encodes: [cDNA] MGC:136976 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001040346 (1) 1014bp
    Genomic GenBank:CABZ01050115 (1) 2328bp
    Polypeptide UniProtKB:A9Y0D5 (1) 285aa
    Sequence Clusters UniGene:93570 (1)
    Sequence Information (all 21)
    OTHER pitx1 GENE PAGES
  • Alliance (1)
  • Gene:678598 (1)
  • Ensembl(GRCz11):ENSDARG00000116608 (1)
  • ORTHOLOGY for pitx1 (Chr: 21)
    CITATIONS (23)