header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-060421-2858
Gene Name: zgc:136439
Gene Symbol: zgc:136439    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: si:busm1-211o13.10 (1), si:dz211o13.10, zgc:123083

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have nucleotidyltransferase activity. Predicted to be involved in biosynthetic process.
Genome Resources: Alliance (1),  Gene:678627 (1),  Ensembl(GRCz11):ENSDARG00000009267 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa21551 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:136439 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:136439 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biosynthetic process (more)
    Cellular Component cellular_component (more)
    Molecular Function nucleotidyltransferase activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005835 (1)
  • InterPro:IPR025877 (1)
  • InterPro:IPR029044 (1)
  • Pfam:PF00483 (1)
  • Pfam:PF12804 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:136439-201 (1)    Ensembl 1029
    zgc:136439-203 (1)    Ensembl 600
    ncRNA zgc:136439-002 (1)    Ensembl 1047
    zgc:136439-003 (1)    Ensembl 1261
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:136439 No data available
    MARKER RELATIONSHIPS
    zgc:136439 Contained in: [BAC] DKEY-204G5 (1) (order this)
    [PAC] BUSM1-211O13 (1) (order this)
    zgc:136439 Encodes: [cDNA] MGC:123083 (1) (order this), MGC:136439 (1) (order this), MGC:158567 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001040372 (1) 997 bp
    Genomic GenBank:CT737230 (1) 122646 bp
    Select Tool
    Polypeptide UniProtKB:A1L210 (1) 274 aa
    Sequence Clusters UniGene:85437 (1)
    Sequence Information (all 25)
    ORTHOLOGY for zgc:136439 ( Chr: 9 )
    CITATIONS (18)