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ZIRC
ZFIN ID: ZDB-GENE-060421-2552
Gene Name: zgc:136472
Gene Symbol: zgc:136472
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to peptidyl-proline 4-dioxygenase activity; predicted to be involved in protein folding, regulation of oxidative stress-induced intrinsic apoptotic signaling pathway, and  ...

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18316 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32593 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:136472 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:136472 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell redox homeostasis (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function CONTRIBUTES_TO peptidyl-proline 4-dioxygenase activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013766 (1)
  • InterPro:IPR036249 (1)
  • PROSITE:PS51352 (1)
  • Pfam:PF00085 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:136472-201 (1) 1696
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:136472 No data available
    MARKER RELATIONSHIPS
    zgc:136472Contained in: [BAC] DKEYP-57D7 (1)
    zgc:136472Encodes: [cDNA] MGC:136472 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001040241 (1) 1726bp
    Genomic GenBank:BX323038 (1) 87548bp
    Select Tool
    Polypeptide UniProtKB:Q6DG87 (1) 518aa
    Sequence Clusters UniGene:81625 (1)
    Sequence Information (all 19)
    ORTHOLOGY for zgc:136472 (Chr: 1)
    CITATIONS (12)