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General Information
ZIRC
ZFIN ID: ZDB-GENE-060322-5
Gene Name: SRY-box transcription factor 1b
Gene Symbol: sox1b
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Contributes to DNA-binding transcription factor activity. Involved in positive regulation of DNA-binding transcription factor activity. Predicted to localize to the nuclear transcription factor  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ka702 Indel Unknown Unknown CRISPR
zko897a Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko897b Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sox1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sox1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of DNA-binding transcription factor activity (more)
    Cellular Component transcription factor complex (more)
    Molecular Function CONTRIBUTES_TO   DNA-binding transcription factor activity (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sox1b-201 (1) 1775
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sox1b No data available
    MARKER RELATIONSHIPS
    sox1b Contained in: [BAC] CH211-138G9 (order this)
    sox1b Encodes: [cDNA] MGC:172019 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001037662 (1) 1773 bp
    Genomic GenBank:AL929216 (1) 174383 bp
    Select Tool
    Polypeptide UniProtKB:Q2Z1R2 (1) 340 aa
    Sequence Clusters UniGene:52415 (1)
    Sequence Information (all 13)
    ORTHOLOGY for sox1b ( Chr: 1 )
    CITATIONS (26)